序列操作套件 SMS2:
蛋白模糊搜索
允许错配地搜索蛋白质序列中与查询相似的位点。
载入示例数据
填充示例序列,方便快速体验
Enter the sequence to search (in raw sequence or FASTA format) into the text area below. Input limit is 2000 characters.
>test sequence GKGKYGLEAFNGKFVQTDGQLAGTANEQTQFTLIFTSGHLVLRDNNGRHLGVDSGTRVLK SSKPGLTKANYFILEDSCPQGAFEFGGKYASLKQGEDVSFKLLVDEDIEDTETFQLEFVE TDKYAIRVCDPKKNSRDAKFWKTVAAGIQANGNSKDQTDCQFSVEYNGNDMHVRAPGGKY
Enter the query sequence into the text area below. Input limit is 30 characters.
Use the following parameters to specify how hits are scored, and to control which hits are returned.
Scoring matrix
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Gap penalty
5
4
3
2
1
0
-1
-2
-3
-4
-5
Report the the top
40
30
20
10
9
8
7
6
5
4
3
2
1
hits.