序列操作套件 SMS2:
比对保守性着色
按保守性对多序列比对结果进行着色。
载入示例数据
填充示例序列,方便快速体验
将
比对序列
(FASTA 或 GDE 格式)粘贴到下方文本框中。输入上限为 200,000,000 个字符。
>CremaneiFEM-2 -------------------MSDSLNHPSSSTVHADDGFEPPTSPEDNNKK PSLEQIKQEREALFTDLFADRRRSARSVIEEAFQNELMSAEPVQPNVPN- -PHSIPIRFRHQPVAGPAHDVFGDAVHSIFQKIMSRGVNADYSHWMSYWI ALGIDKKT-QMNYHMKPFCKDTYATEGSLEAKQTFTDKIRSAVEEIIWKS AEYCDILSEKWTGIHVSADQLKGQRNKQEDRFVAYPNGQYMNRGQ-SDIS LLAVFDGHGGHECSQYAAAHFWEAWSDAQHHHSQDMKLDELLEKALETLD ERMTVRSVRESWKGGTTAVCCAVDLNTNQIAFAWLGDSPGYIMSNLEFRK FTTEHSPSDPEECRRVEEVGGQIFVIGGELRVNGVLNLTRALGDVPGRPM ISNKPDTLLKTIEPADYLVLLACDGISDVFNTSDLYNLVQAFVNEYDVED YHELARYICNQAVSAGSADNVTVVIGFLRPPEDVWRVMKTDSDDEESELE EEDDNE >CelegansFEM-2 -------------------------------------------------- --MEKVNEERDAVFEDHIGDRRRSVRSLLEEAFADEMEKTSYDVEVADTP -QPHIPIRFRHPPIAGPVHDVFGDAIHDIFQKMMKRGQAVDFCHWVSHLI ATEIDEKFSEVAFRDVQYNPDIYVTDSTTEAKKLFNDKIWPAIDKILQQN AETCPILSEKWSGIHVSGDQLKGQRHKQEDRFLAYPNGQYMDRGE-DPIS VLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLD ERMTVRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDSPGYVMSNIEFRQ LTRGHSPSDEREARRVEEAGGQLFVIGGELRVNGVLNLTRALGDVPGRPM ISNEPETCQVPIESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVED YAELSRFICTKAIEAGSADNVSVVIGFLRPPQDVWKLMKHESDDEDSDVT DEE--- >CbriggsaeFEM-2 MSGPPPPKTNEKSSQPVTGRSQEPTRKGQLGPNYLRIIEEDEEYGHALLE PSEEQIKFEREALFEDLHLDRQRSARSFIEETFEEEMLGPQNGIPPTTES PQSYIPIRYRNPPAAAPVHDVFGDAVHAIFQKLMTRGPPVEYCHWMSYWI AKQIDKDS-PVKYHECRFTPDQYVTENTAEAKKTYMDNMWKAAEKNLWMY TYNSPLLRTKWTGIHVSAEQIKGQRHKQEDRFVAYPNSLYMDTSRSDHIA LLGVFDGHGGHECSQYAAGHMWETWIETRASHFEEP-LEKQLKTSLDLLD ERMTVRSTKECWKGGTTAVCCAIDMNKKELAFAWLGDSPGYIMDNLEVRK VTRDHSPSDPEEGRRVEEAGGQLFVIGGELRVNGVLNLTRALGDVPGRPM ISNQAETCQRDIEVGDYLVILACDGISDVFNTSDLYNLVQAYVNENPVEE YNDLAHYICHEAIAHGSTDNVTVVIGFLRPPQDLWRMMKIDEESDEEEDE VDDE--
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residues per line.
Percentage of sequences that must agree for identity or similarity coloring to be added:
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Used colored
backgrounds
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Enter the groups of similar amino acids separated by commas to be used for the similarity calculation. If you are coloring a DNA alignment, leave this text area empty.
GAVLI, FYW, CM, ST, KRH, DENQ, P
Enter the starting positions of the sequences separated by commas (to alter residue numbering). An example entry is:
0, 200, 0, -1
. If no numbers are given, the default starting position of 0 is used for each sequence.